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D5a2a1分析,含陶家寨、横北村样本

55Altain KazakhDD5a2a1051 164 172  189 223 266 362
Hui51HuiDD5a2a1164 172 182 183 189 223 266 362
Uyg38UygurDD5a2a1092 164 182 183 189 223 266 362
55Hengbeicun,Shanxi,xizhouDD5a2a1164 182 183 189 223 266 362
Br 349BuryatDD5a2a1164 172 182 183 189 223 266 362
B 122PolishDD5a2a1a1092 102 164 182 183 189 193.1C 223  266 362
2821Ngari, TibetDD5a2a1092 164 172 182 183 189 223 243 266  362
5652Chamdo, TibetDD5a2a1092 129 164 182 183 189 223 266 362
5436Lhasa, TibetDD5a2a1164 172 182 183 189 223 266 362
5158Nyingchi, TibetDD5a2a1164 172 182 183 189 209 223 266 362
2013LhobaDD5a2a1092 164 172 182 183 189 223 266 325  362
1641MonbaDD5a2a1092 164 172 183 189 223 266 362
33Manchu,JilinDD5a2a1092 164 167 172 182 183 189 223 266  272 293 362
7TaojiazhaiDD5a2a1164 170 172 182 183 189 223 266 362
MosuoDD5a2a1092 111 129 164 179 189 223 266 362
natsuyaHan,TaiwanDD5a2a1162 164 172 182 183 189 223 362
Nepalese040NepalDD5a2a1164 182 183 189 223 266 362
(03B)0030chaoshanDD5a2a1164 172 182 183 189 223 266 362  (519)
AP008258.1JapaneseDD5a2a1051 164 172 182 183 189 223 266 362
昆仑玉碎Han zhejiangDD5a2a1086 092 164 172 182 183 189 223 266  362
D5a2a1DD5a2a1092 164 172 182 183 189 223 266 362

D5a2a1样本在藏缅系族群的D5特别是D5a2a样本中占有压倒性优势,古代族见于陶家寨、横北村。

方便计算,把相似样本忽略了。所有样本大约分享17,179年前共组,图片选择区域,大约分享8409年前共祖。
陶家寨7号、横北村55号 年代.jpg
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新技术方案尝试:低覆盖全基因组,最低成本深度解析父系源流,略有成效,大家一起摸索。微博@基因人王冰 QQ群:387100816。
相較之下,雅庫特人的D5主要是D5a2a2。

http://www.biomedcentral.com/content/pdf/1471-2148-13-127.pdf
Autosomal and uniparental portraits of the native
populations of Sakha (Yakutia): implications for
the peopling of Northeast Eurasia


Abstract
Background: Sakha – an area connecting South and Northeast Siberia – is significant for understanding the history
of peopling of Northeast Eurasia and the Americas. Previous studies have shown a genetic contiguity between
Siberia and East Asia and the key role of South Siberia in the colonization of Siberia.
Results: We report the results of a high-resolution phylogenetic analysis of 701 mtDNAs and 318 Y chromosomes from
five native populations of Sakha (Yakuts, Evenks, Evens, Yukaghirs and Dolgans) and of the analysis of more than
500,000 autosomal SNPs of 758 individuals from 55 populations, including 40 previously unpublished samples from
Siberia. Phylogenetically terminal clades of East Asian mtDNA haplogroups C and D and Y-chromosome haplogroups
N1c, N1b and C3, constituting the core of the gene pool of the native populations from Sakha, connect Sakha and
South Siberia. Analysis of autosomal SNP data confirms the genetic continuity between Sakha and South Siberia.
Maternal lineages D5a2a2, C4a1c, C4a2, C5b1b and the Yakut-specific STR sub-clade of Y-chromosome haplogroup N1c
can be linked to a migration of Yakut ancestors, while the paternal lineage C3c was most likely carried to Sakha by the
expansion of the Tungusic people. MtDNA haplogroups Z1a1b and Z1a3, present in Yukaghirs, Evens and Dolgans,
show traces of different and probably more ancient migration(s). Analysis of both haploid loci and autosomal SNP data
revealed only minor genetic components shared between Sakha and the extreme Northeast Siberia. Although the
major part of West Eurasian maternal and paternal lineages in Sakha could originate from recent admixture with
East Europeans, mtDNA haplogroups H8, H20a and HV1a1a, as well as Y-chromosome haplogroup J, more
probably reflect an ancient gene flow from West Eurasia through Central Asia and South Siberia.
Conclusions: Our high-resolution phylogenetic dissection of mtDNA and Y-chromosome haplogroups as well as
analysis of autosomal SNP data suggests that Sakha was colonized by repeated expansions from South Siberia with
minor gene flow from the Lower Amur/Southern Okhotsk region and/or Kamchatka. The minor West Eurasian
component in Sakha attests to both recent and ongoing admixture with East Europeans and an ancient gene flow
from West Eurasia.
Y染色體:O3 M134+ M117- 應屬F444+
mtDNA:D5a2
相較之下,雅庫特人的D5主要是D5a2a2。

http://www.biomedcentral.com/content/pdf/1471-2148-13-127.pdf
Autosomal and uniparental portraits of the native
populations of Sakha (Yakutia): implications f ...
natsuya 发表于 2013-9-24 21:18
定义D5a2a2的A8479G不是高变区数据,除了极少的全基因组测试外,大多数D5a2a2应当隐藏在D5a2a*里,其分布应当比目前看到的广。
新技术方案尝试:低覆盖全基因组,最低成本深度解析父系源流,略有成效,大家一起摸索。微博@基因人王冰 QQ群:387100816。
Maternal lineages D5a2a2, C4a1c, C4a2, C5b1b and the Yakut-specific STR sub-clade of Y-chromosome haplogroup N1c can be linked to a migration of Yakut ancestors, while the paternal lineage C3c was most likely carried to Sakha by the expansion of the Tungusic people. MtDNA haplogroups Z1a1b and Z1a3, present in Yukaghirs, Evens and Dolgans,
show traces of different and probably more ancient migration(s). Analysis of both haploid loci and autosomal SNP data revealed only minor genetic components shared between Sakha and the extreme Northeast Siberia. Although the major part of West Eurasian maternal and paternal lineages in Sakha could originate from recent admixture with
East Europeans, mtDNA haplogroups H8, H20a and HV1a1a, as well as Y-chromosome haplogroup J, more probably reflect an ancient gene flow from West Eurasia through Central Asia and South Siberia.
Y染色體:O3 M134+ M117- 應屬F444+
mtDNA:D5a2
那個16台灣漢族是指我?
Y染色體:O3 M134+ M117- 應屬F444+
mtDNA:D5a2
那個16台灣漢族是指我?
natsuya 发表于 2013-9-24 21:28
是的,也是D5a2a1*。
新技术方案尝试:低覆盖全基因组,最低成本深度解析父系源流,略有成效,大家一起摸索。微博@基因人王冰 QQ群:387100816。
是的,也是D5a2a1*。
Yungsiyebu 发表于 2013-9-24 21:31
我的高變1區突變位點算多的,比較好判斷,到時候等SNP測試結果應證了。
Y染色體:O3 M134+ M117- 應屬F444+
mtDNA:D5a2
我的母系是D5a2a1b,貌似和楼主贴的这个有相似之处。
zzzz你好,我們母系同是D5a2的親族。我參加美國23andMe的檢測,經過mtDNA的SNP分析結果就是D5a2。我外婆來自澎湖,更早母系祖先來自福建泉州。記得古DNA的結果,古夏人最常見的母系就是D5。西伯利亞的亞庫特人(Yakuts,突厥語族)也常見母系D5a2a,沒記錯的話。閩南人似乎也是D5比較高發的民系吧。
Y染色體:O3 M134+ M117- 應屬F444+
mtDNA:D5a2
zzzz你好,我們母系同是D5a2的親族。我參加美國23andMe的檢測,經過mtDNA的SNP分析結果就是D5a2。我外婆來自澎湖,更早母系祖先來自福建泉州。記得古DNA的結果,古夏人最常見的母系就是D5。西伯利亞的亞庫特人(Yakut ...
natsuya 发表于 2016-6-27 15:57
古夏人要是D5高频的话那还是跟北方民族的关系更紧密,南方民族很少有D5高频的。有些人总是宣称古中原是东南亚人,可是分子人类学并不支持这种观点。
zzzz你好,我們母系同是D5a2的親族。我參加美國23andMe的檢測,經過mtDNA的SNP分析結果就是D5a2。我外婆來自澎湖,更早母系祖先來自福建泉州。記得古DNA的結果,古夏人最常見的母系就是D5。西伯利亞的亞庫特人(Yakut ...
natsuya 发表于 2016-6-27 15:57
11# zzzz 握手,家父和你的Mt相同
哈哈,横北村和陶家寨的D5是D5a2a1,老永的分析显示跟阿尔泰哈萨克,维兀尔,回族,布里亚特,西藏等民族的D5比较接近,同时跟雅库特的D5a2a2也是姐妹簇。

哈哈,我的推测看来又正确了。某些人说古中原的D5和南方和南岛的关系最近,这下现眼了吧。
13# MNOPS 雅库特人的 D5总体上并不高。
内蒙东部蒙古人难道不算是东亚北部?日韩难道不算是东亚北部或东北亚?
MNOPS 发表于 2016-10-18 14:25
你就继续装瞎吧。内蒙古东部算东亚北部,日韩算东北亚,但这只是地理上的。就像南亚人种和南亚没关系一样。你就继续无视内蒙东部蒙古人母系属于东亚不属于北亚这一事实。
O3a3c* (M134+, M117-)
13# MNOPS 雅库特人的 D5总体上并不高。
wanhuatong 发表于 2016-10-18 14:49
关键在于,他一个雅库特就能代表整个北亚?
O3a3c* (M134+, M117-)
13# MNOPS 雅库特人的 D5总体上并不高。
wanhuatong 发表于 2016-10-18 14:49
但也不低,一百多个人里面大概能测出十几到二十几个。而且他们的D5a2a2也是古中原D5a2a1的姐妹簇。
关键在于,他一个雅库特就能代表整个北亚?
hercules 发表于 2016-10-18 23:42
我没说雅库特代表整个北亚,但从老永提供的这份类聚分析显示,古中原的D5显然更接近北方和西北方的民族。
18# MNOPS 父系,母系这种东西存在一个漂变的影响,但从常染色体上来看,是很难接近古代北亚了。古代中原人群也不太可能有更高的西伯利亚成分,
我没说雅库特代表整个北亚,但从老永提供的这份类聚分析显示,古中原的D5显然更接近北方和西北方的民族。
MNOPS 发表于 2016-10-19 20:13
你咋不说雅库特和陶家寨的D5更接近古中原呢?
O3a3c* (M134+, M117-)
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